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PP1S83_72V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S83_72V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S83_72V6.1Predicted protein (402 aa)    
Predicted Functional Partners:
PP1S3_96V6.2
Predicted protein (411 aa)
   
 
  0.995
PP1S114_123V6.2
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family (410 aa)
   
 
  0.995
PP1S28_304V6.1
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX (570 aa)
   
 
  0.991
PP1S45_76V6.2
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX (521 aa)
   
 
  0.990
PP1S5_369V6.1
Uroporphyrinogen decarboxylase ; Belongs to the uroporphyrinogen decarboxylase family (430 aa)
   
   
  0.955
PP1S79_84V6.1
Predicted protein (153 aa)
     
   
  0.937
PP1S79_83V6.1
Predicted protein (135 aa)
     
   
  0.937
PP1S300_38V6.1
Predicted protein (538 aa)
     
   
  0.937
PP1S54_66V6.4
Predicted protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (485 aa)
     
   
  0.916
PP1S15_292V6.1
Predicted protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (484 aa)
     
   
  0.916
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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