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STRINGSTRING
PP1S8410_2V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S8410_2V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S8410_2V6.1annotation not available (291 aa)    
Predicted Functional Partners:
PP1S198_161V6.1
Predicted protein (310 aa)
 
  0.995
PP1S381_24V6.1
Predicted protein (305 aa)
 
  0.995
PP1S13_142V6.1
Predicted protein; Belongs to the TrpA family (347 aa)
 
 
  0.975
PP1S173_123V6.1
Uncharacterized protein (410 aa)
   
  0.956
PP1S43_232V6.1
Predicted protein; Imidazole glycerol phosphate synthase subunit hisF ; Belongs to the HisA/HisF family (617 aa)
 
   
  0.953
PP1S330_9V6.1
Predicted protein (432 aa)
 
 
  0.917
PP1S192_62V6.1
Predicted protein (405 aa)
 
 
  0.905
PP1S68_239V6.1
Predicted protein; N-(5’-phosphoribosyl)anthranilate isomerase (297 aa)
 
   
  0.882
PP1S3_514V6.1
Tryptophan synthase (472 aa)
 
   
  0.815
PP1S27_256V6.1
Tryptophan synthase (196 aa)
 
   
  0.815
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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