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STRINGSTRING
PP1S84_180V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S84_180V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S84_180V6.1Predicted protein (216 aa)    
Predicted Functional Partners:
PP1S263_81V6.1
annotation not available (1220 aa)
       
 
  0.913
PP1S113_110V6.1
Predicted protein; Belongs to the PI3/PI4-kinase family (1208 aa)
       
 
  0.913
PP1S88_186V6.1
Predicted protein (1189 aa)
   
 
  0.868
PP1S81_123V6.1
Predicted protein (1194 aa)
   
 
  0.868
PP1S85_191V6.1
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family (444 aa)
     
 
  0.849
PP1S20_16V6.1
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family (444 aa)
     
 
  0.849
PP1S167_1V6.1
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family (444 aa)
     
 
  0.849
PP1S100_23V6.1
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family (444 aa)
     
 
  0.849
PP1S131_128V6.1
Predicted protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family (1118 aa)
     
 
  0.802
PP1S66_218V6.1
annotation not available (1556 aa)
     
 
  0.704
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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