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STRINGSTRING
PP1S84_209V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S84_209V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S84_209V6.1Predicted protein (356 aa)    
Predicted Functional Partners:
PP1S2_737V6.1
Predicted protein; Belongs to the 3-beta-HSD family (460 aa)
     
 
  0.988
PP1S56_71V6.1
Predicted protein (378 aa)
         
  0.953
PP1S76_39V6.1
Predicted protein (315 aa)
     
 
  0.947
PP1S200_22V6.1
Predicted protein (315 aa)
     
 
  0.947
PP1S137_96V6.3
Predicted protein (1399 aa)
   
   
  0.834
PP1S163_63V6.1
Predicted protein (362 aa)
   
 
0.809
PP1S126_185V6.1
Predicted protein (347 aa)
   
   
 
0.808
PP1S218_20V6.1
Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery (125 aa)
       
      0.777
PP1S75_227V6.1
Predicted protein (318 aa)
     
   
  0.771
PP1S184_82V6.1
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress (347 aa)
         
  0.760
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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