• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
CHR1541 protein (Physcomitrella patens) - STRING interaction network
"CHR1541" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHR1541annotation not available (1166 aa)    
Predicted Functional Partners:
PP1S31_24V6.1
annotation not available (1688 aa)
     
 
  0.932
PP1S328_43V6.1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (114 aa)
       
 
  0.931
CPC1504
Structural maintenance of chromosomes protein (1196 aa)
   
 
  0.900
PP1S89_20V6.1
Predicted protein (142 aa)
       
 
  0.898
PP1S93_68V6.1
Predicted protein (422 aa)
     
      0.803
PP1S79_74V6.1
Predicted protein (324 aa)
     
      0.803
PP1S355_21V6.1
Predicted protein (752 aa)
     
 
  0.801
PP1S2_36V6.1
annotation not available (563 aa)
     
 
  0.801
PP1S197_12V6.1
Predicted protein (145 aa)
     
      0.794
PP1S403_37V6.1
Predicted protein (56 aa)
       
      0.791
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (7%) [HD]