• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S84_48V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S84_48V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S84_48V6.2Predicted protein (171 aa)    
Predicted Functional Partners:
PP1S42_89V6.1
annotation not available (750 aa)
           
  0.616
PP1S35_3V6.1
Predicted protein; Belongs to the DEAD box helicase family (497 aa)
           
  0.616
PP1S138_142V6.1
annotation not available (732 aa)
           
  0.616
PP1S197_43V6.1
Predicted protein (120 aa)
           
  0.610
PP1S9_212V6.3
annotation not available (294 aa)
     
   
  0.609
PP1S84_129V6.1
Predicted protein (2124 aa)
           
  0.608
PP1S144_111V6.1
Predicted protein (332 aa)
           
  0.608
PP1S478_13V6.2
Predicted protein (358 aa)
           
  0.576
PP1S169_102V6.1
Predicted protein (358 aa)
           
  0.576
PP1S97_286V6.1
Serine/threonine-protein phosphatase (321 aa)
       
 
  0.570
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (9%) [HD]