STRINGSTRING
PP1S84_58V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S84_58V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S84_58V6.1Predicted protein (367 aa)    
Predicted Functional Partners:
PP1S9_445V6.1
Annotation not available (767 aa)
     
 
  0.949
SWDB1502
Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 (328 aa)
       
 
  0.884
SWDB1501
Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 (328 aa)
       
 
  0.884
PP1S88_100V6.1
Predicted protein (159 aa)
       
 
  0.784
PP1S36_103V6.1
Predicted protein (570 aa)
       
 
  0.784
RS27
Predicted protein (233 aa)
       
 
  0.723
PP1S31_248V6.2
Predicted protein (1224 aa)
       
 
  0.713
PP1S136_10V6.1
Predicted protein (1223 aa)
       
 
  0.713
PP1S312_18V6.2
Annotation not available (576 aa)
     
 
  0.690
PP1S7_8V6.1
Predicted protein (349 aa)
       
 
  0.687
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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