STRINGSTRING
PP1S84_5V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S84_5V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S84_5V6.1Annotation not available (144 aa)    
Predicted Functional Partners:
GPB1
GPB1 heterotrimeric G protein beta subunit protein (379 aa)
     
  0.987
PLC6
PLC6 phospholipase C protein (666 aa)
     
  0.941
PLC7
PLC7 phospholipase C (630 aa)
     
  0.941
PLC5
PLC5 phospholipase C signalling component (628 aa)
     
  0.941
PLC2
PLC2 phosphlipase C protein (616 aa)
     
  0.941
PLC4
PLC4 phospholiase C protein (639 aa)
     
  0.941
PLC1
PLC1 phospholiase C (634 aa)
     
  0.941
PP1S101_171V6.1
Annotation not available (628 aa)
     
  0.941
Rop4
Predicted proteinRop-family small GTPase (196 aa)
       
  0.904
Rop3
Rop-family small GTPase (196 aa)
       
  0.904
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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