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STRINGSTRING
PP1S85_111V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S85_111V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S85_111V6.1Predicted protein; Belongs to the mitochondrial carrier (TC 2.A.29) family (331 aa)    
Predicted Functional Partners:
PP1S72_148V6.1
Predicted protein; Belongs to the arginase family (355 aa)
     
   
  0.647
PP1S274_69V6.1
Urease ; In the C-terminal section; belongs to the metallo- dependent hydrolases superfamily. Urease alpha subunit family (837 aa)
           
  0.621
PP1S1825_1V6.1
Predicted protein (345 aa)
           
  0.621
PP1S355_13V6.1
Predicted protein (483 aa)
           
  0.575
PP1S246_62V6.1
annotation not available (407 aa)
           
  0.575
PP1S213_9V6.1
annotation not available (533 aa)
     
   
  0.527
PP1S189_99V6.1
Predicted protein; Belongs to the ATCase/OTCase family (535 aa)
     
   
  0.527
PP1S90_118V6.1
Predicted protein (502 aa)
           
  0.526
PP1S533_4V6.1
annotation not available (366 aa)
           
  0.526
PP1S124_13V6.1
Predicted protein (502 aa)
           
  0.526
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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