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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
lrrp protein (Physcomitrella patens) - STRING interaction network
"lrrp" - Leucine-rich repeat protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrrpLeucine-rich repeat protein (404 aa)    
Predicted Functional Partners:
PP1S1362_2V6.1
Predicted protein (305 aa)
     
 
  0.629
PP1S88_186V6.1
Predicted protein (1189 aa)
   
 
  0.450
PP1S81_123V6.1
Predicted protein (1194 aa)
   
 
  0.450
PP1S508_15V6.1
annotation not available (150 aa)
   
          0.439
PP1S58_225V6.1
annotation not available (364 aa)
   
          0.435
PP1S74_217V6.1
annotation not available (311 aa)
   
          0.434
PP1S132_201V6.1
annotation not available (285 aa)
   
          0.433
PP1S107_124V6.1
annotation not available (206 aa)
   
          0.433
PP1S79_197V6.1
annotation not available (235 aa)
   
 
      0.432
PP1S68_69V6.1
Predicted protein (174 aa)
   
          0.431
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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