STRINGSTRING
PP1S85_35V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S85_35V6.1" - Predicted protein in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S85_35V6.1Predicted protein (353 aa)    
Predicted Functional Partners:
PP1S80_34V6.1
Predicted protein (847 aa)
       
  0.982
PP1S240_31V6.1
Predicted protein (193 aa)
       
  0.919
PP1S206_54V6.1
Annotation not available (573 aa)
       
  0.901
PP1S145_26V6.1
Predicted protein (750 aa)
     
 
  0.772
PP1S18_235V6.1
Predicted protein (716 aa)
     
 
  0.770
PP1S51_220V6.1
Annotation not available (1336 aa)
     
 
  0.763
PP1S46_194V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
     
  0.761
PP1S227_112V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (224 aa)
     
  0.761
PP1S223_54V6.1
DNA ligase (776 aa)
     
  0.721
PP1S150_94V6.2
Annotation not available (987 aa)
       
  0.713
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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