STRINGSTRING
PP1S85_84V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S85_84V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S85_84V6.1Predicted protein (360 aa)    
Predicted Functional Partners:
PP1S223_42V6.1
Predicted protein (259 aa)
   
    0.982
PP1S28_327V6.1
Inosine-5’-monophosphate dehydrogenase (416 aa)
       
  0.977
PP1S269_71V6.1
Inosine-5’-monophosphate dehydrogenase (507 aa)
       
  0.977
PP1S114_124V6.1
Predicted protein (286 aa)
       
  0.950
PP1S8_124V6.1
Predicted protein (542 aa)
       
    0.944
PP1S5_53V6.1
Predicted protein (479 aa)
         
  0.943
PP1S523_22V6.1
Predicted protein (489 aa)
         
  0.943
PP1S77_89V6.1
Predicted protein (873 aa)
         
    0.940
PP1S5_276V6.1
Annotation not available (306 aa)
         
    0.940
PP1S307_76V6.1
Annotation not available (951 aa)
         
    0.940
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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