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STRINGSTRING
PP1S86_153V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S86_153V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S86_153V6.1Predicted protein (700 aa)    
Predicted Functional Partners:
PP1S80_72V6.1
Predicted protein (299 aa)
       
  0.986
PP1S87_156V6.1
annotation not available (307 aa)
       
 
  0.933
Cry1b
AtCRY1/HY4-like cryptochrome blue light photoreceptor protein (413 aa)
       
  0.924
CRY1a
Blue light photoreceptor cryptochrome; Cryptochrome 1a (727 aa)
       
  0.924
PP1S25_199V6.2
Predicted protein (459 aa)
       
 
  0.823
PP1S245_57V6.1
Predicted protein (461 aa)
       
 
  0.823
PP1S268_17V6.1
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (159 aa)
       
 
  0.795
PP1S210_48V6.1
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (159 aa)
       
 
  0.795
PP1S69_245V6.1
Predicted protein (429 aa)
       
 
  0.686
PP1S296_67V6.1
Predicted protein (449 aa)
       
 
  0.686
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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