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STRINGSTRING
PP1S86_196V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S86_196V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S86_196V6.1annotation not available (237 aa)    
Predicted Functional Partners:
PP1S33_38V6.1
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment (192 aa)
     
 
  0.936
PP1S254_31V6.1
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment (193 aa)
     
 
  0.936
PP1S162_33V6.1
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment (193 aa)
     
 
  0.936
PP1S98_2V6.1
Glutathione peroxidase ; Belongs to the glutathione peroxidase family (170 aa)
     
   
  0.888
PP1S313_51V6.1
annotation not available (1252 aa)
     
   
  0.888
PP1S297_8V6.1
Glutathione peroxidase ; Belongs to the glutathione peroxidase family (184 aa)
     
   
  0.888
PP1S115_90V6.2
Glutathione peroxidase ; Belongs to the glutathione peroxidase family (257 aa)
     
   
  0.888
PP1S68_237V6.1
Predicted protein (361 aa)
           
  0.887
PP1S269_34V6.1
Predicted protein (390 aa)
           
  0.887
PP1S32_124V6.1
Predicted protein (530 aa)
     
 
  0.868
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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