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STRINGSTRING
Rab21A3 protein (Physcomitrella patens) - STRING interaction network
"Rab21A3" - Rab21-family small GTPase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rab21A3Rab21-family small GTPase (222 aa)    
Predicted Functional Partners:
PP1S49_250V6.2
Predicted protein (550 aa)
       
 
  0.917
PP1S50_146V6.1
Predicted protein (183 aa)
       
 
  0.604
PP1S252_14V6.1
Predicted protein (172 aa)
       
 
  0.604
PP1S23_59V6.1
Predicted protein (172 aa)
       
 
  0.604
PP1S23_58V6.2
Predicted protein (172 aa)
       
 
  0.604
PP1S194_74V6.1
Predicted protein (69 aa)
       
 
  0.604
PP1S138_60V6.1
Predicted protein (188 aa)
       
 
  0.604
PP1S130_254V6.1
Predicted protein (188 aa)
       
 
  0.604
PP1S61_292V6.2
annotation not available (114 aa)
     
   
  0.525
PP1S9_88V6.1
annotation not available (421 aa)
           
  0.523
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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