STRINGSTRING
PP1S87_193V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S87_193V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S87_193V6.1Predicted protein (682 aa)    
Predicted Functional Partners:
PP1S47_222V6.1
Predicted protein (303 aa)
   
 
  0.812
PP1S245_12V6.1
Predicted protein (379 aa)
   
 
  0.812
PP1S169_113V6.1
Predicted protein (306 aa)
   
 
  0.812
PP1S372_25V6.1
Predicted protein (358 aa)
   
  0.784
PP1S15_227V6.1
Predicted protein (410 aa)
   
  0.784
PP1S2633_1V6.1
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (701 aa)
   
 
  0.740
PP1S6_148V6.1
Predicted protein (313 aa)
   
 
  0.682
PP1S93_131V6.1
Predicted protein (2251 aa)
   
   
  0.643
PP1S81_196V6.1
Predicted protein (2214 aa)
   
   
  0.643
PP1S79_140V6.1
Predicted protein (2213 aa)
   
   
  0.643
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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