STRINGSTRING
PP1S87_90V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S87_90V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S87_90V6.1Predicted protein (852 aa)    
Predicted Functional Partners:
HY2
Predicted protein (405 aa)
       
 
  0.675
PHY5a
Phytochrome 5a; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1155 aa)
       
 
  0.660
PP1S311_27V6.1
Predicted protein (1488 aa)
       
 
  0.649
PHY2
Phytochrome 2; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1130 aa)
       
 
  0.608
PHY4
Phytochrome 4; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1126 aa)
       
 
  0.581
PP1S47_242V6.1
Predicted protein (753 aa)
       
 
  0.579
PP1S158_158V6.1
Annotation not available (767 aa)
       
 
  0.579
PP1S29_32V6.1
Annotation not available (477 aa)
     
 
  0.556
PP1S29_23V6.1
Predicted protein (475 aa)
     
 
  0.556
PP1S27_359V6.1
Predicted protein (492 aa)
     
 
  0.556
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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