STRINGSTRING
PP1S88_114V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S88_114V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S88_114V6.1Annotation not available (500 aa)    
Predicted Functional Partners:
TLP3A
TLP3A TIR1-like auxin receptor protein (693 aa)
       
  0.991
TLP2A
TLP2A TIR1-like auxin receptor protein (592 aa)
       
  0.991
PP1S24_60V6.1
Predicted protein (584 aa)
       
  0.991
TLP2B
TLP2B TIR1-like auxin receptor protein (593 aa)
       
  0.991
TLP3B
TLP3B TIR1-like auxin receptor protein (667 aa)
       
  0.991
TLP3C
TLP3C TIR1-like auxin receptor protein (615 aa)
       
  0.991
PP1S74_41V6.1
Predicted protein (748 aa)
     
  0.986
PP1S11_350V6.2
Predicted protein (399 aa)
     
  0.986
PP1S74_38V6.1
Predicted protein (750 aa)
     
 
  0.934
PP1S5_289V6.1
Predicted protein (755 aa)
     
 
  0.934
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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