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STRINGSTRING
PP1S88_123V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S88_123V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S88_123V6.1annotation not available (1402 aa)    
Predicted Functional Partners:
PP1S159_159V6.1
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (162 aa)
     
 
  0.691
PP1S78_86V6.1
annotation not available (607 aa)
     
 
  0.634
PP1S248_48V6.1
annotation not available (595 aa)
     
 
  0.634
PP1S65_58V6.1
Predicted protein (125 aa)
       
      0.622
PP1S141_103V6.1
Predicted protein (142 aa)
           
  0.607
PP1S30_111V6.1
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family (245 aa)
     
 
  0.603
PP1S48_125V6.1
annotation not available (2144 aa)
           
  0.588
PP1S25_273V6.1
Predicted protein (3053 aa)
           
  0.588
PP1S55_143V6.1
Predicted protein (608 aa)
     
   
  0.583
PP1S452_21V6.1
Predicted protein (652 aa)
     
   
  0.583
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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