STRINGSTRING
PP1S88_200V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S88_200V6.1" - Annotation not available in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S88_200V6.1Annotation not available (1136 aa)    
Predicted Functional Partners:
CDKA
Predicted protein (294 aa)
     
      0.947
PP1S7_399V6.1
Predicted protein; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (93 aa)
       
      0.921
PP1S36_271V6.1
Predicted protein; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (91 aa)
       
      0.921
PP1S7_56V6.1
Predicted protein (743 aa)
       
      0.919
PP1S7_15V6.1
Predicted protein (830 aa)
       
      0.919
PP1S163_96V6.1
Predicted protein (745 aa)
       
      0.919
PP1S42_89V6.1
Annotation not available (750 aa)
     
      0.667
PP1S138_142V6.1
Annotation not available (732 aa)
     
      0.667
PP1S84_31V6.1
Predicted protein (468 aa)
     
      0.659
PP1S84_1V6.1
Predicted protein (469 aa)
     
      0.659
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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