• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S88_47V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S88_47V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S88_47V6.1Predicted protein (666 aa)    
Predicted Functional Partners:
PP1S163_26V6.2
Predicted protein (583 aa)
 
  0.995
PP1S80_97V6.1
Predicted protein (429 aa)
 
 
  0.943
PP1S63_119V6.1
Predicted protein (422 aa)
 
 
  0.943
PP1S88_151V6.2
annotation not available (231 aa)
     
        0.885
PP1S342_35V6.1
Predicted protein (211 aa)
     
        0.885
PP1S184_139V6.1
Predicted protein (370 aa)
     
        0.877
PP1S54_91V6.1
Predicted protein (517 aa)
     
        0.873
PP1S297_5V6.1
Predicted protein (521 aa)
     
        0.873
PP1S72_262V6.1
Predicted protein; Phosphoribosylformylglycinamidine cyclo-ligase (386 aa)
   
 
  0.857
PP1S53_111V6.1
Predicted protein; Phosphoribosylformylglycinamidine cyclo-ligase (388 aa)
   
 
  0.857
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (10%) [HD]