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STRINGSTRING
PP1S89_222V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S89_222V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S89_222V6.1Predicted protein (521 aa)    
Predicted Functional Partners:
PP1S5_92V6.1
annotation not available (1043 aa)
     
      0.866
PP1S218_14V6.1
annotation not available (872 aa)
     
        0.860
PP1S23_262V6.1
annotation not available (153 aa)
     
   
  0.719
PP1S51_107V6.1
annotation not available (479 aa)
     
   
  0.616
PP1S1_793V6.3
annotation not available (291 aa)
     
      0.616
PP1S117_81V6.1
Predicted protein (341 aa)
     
      0.592
PP1S441_33V6.2
Predicted protein (590 aa)
     
        0.549
PP1S2633_1V6.1
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (701 aa)
     
   
  0.540
PP1S9_199V6.1
annotation not available (594 aa)
     
   
  0.532
PP1S178_72V6.2
Predicted protein (593 aa)
     
   
  0.532
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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