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STRINGSTRING
PP1S89_30V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S89_30V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S89_30V6.1Predicted protein (216 aa)    
Predicted Functional Partners:
PP1S15_288V6.1
Predicted protein (384 aa)
     
 
  0.999
PP1S123_7V6.1
Predicted protein; Belongs to the sterol desaturase family (333 aa)
     
 
  0.988
PP1S505_6V6.1
Methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family (345 aa)
         
  0.988
PP1S34_401V6.1
Predicted protein (322 aa)
     
   
  0.974
PP1S138_16V6.1
Predicted protein (659 aa)
     
 
  0.959
PP1S130_191V6.1
Predicted protein (566 aa)
     
 
  0.959
PP1S205_27V6.1
Methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family (368 aa)
     
 
  0.959
PP1S148_43V6.1
Methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family (349 aa)
     
 
  0.959
PP1S148_1V6.1
Methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family (373 aa)
     
 
  0.959
PP1S31_31V6.1
Predicted protein; Belongs to the sterol desaturase family (275 aa)
     
 
  0.954
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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