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STRINGSTRING
PPMA8 protein (Physcomitrella patens) - STRING interaction network
"PPMA8" - MIKC MADS--domain protein PPMA8 in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPMA8MIKC MADS--domain protein PPMA8 (410 aa)    
Predicted Functional Partners:
PP1S160_78V6.1
annotation not available (2263 aa)
       
 
  0.828
HAC1502
p300/CBP acetyltransferase-related protein (1255 aa)
       
 
  0.610
PP1S404_36V6.1
annotation not available (222 aa)
       
 
  0.610
PP1S365_10V6.1
annotation not available (477 aa)
       
 
  0.610
PP1S314_51V6.1
Predicted protein (538 aa)
       
 
  0.610
PP1S271_32V6.1
Predicted protein (553 aa)
       
 
  0.610
HAC1501
annotation not available (1866 aa)
       
 
  0.610
PP1S100_146V6.1
Polycomb group protein (999 aa)
       
 
  0.507
PGE1501
Transcriptional repressor EED/ESC/FIE (376 aa)
           
  0.497
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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