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STRINGSTRING
PP1S8_227V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S8_227V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S8_227V6.1annotation not available (537 aa)    
Predicted Functional Partners:
PP1S210_60V6.1
Predicted protein (595 aa)
           
  0.700
MKN2
KNOX class 1 protein MKN2 (445 aa)
           
  0.591
MKN5
KNOX class 1 protein MKN5 (508 aa)
           
  0.591
PP1S47_263V6.1
Predicted protein (655 aa)
           
  0.511
PP1S158_188V6.1
Predicted protein (571 aa)
           
  0.511
PP1S305_4V6.1
annotation not available (192 aa)
           
  0.510
PP1S161_105V6.1
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (591 aa)
           
  0.510
PP1S108_182V6.1
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (580 aa)
           
  0.510
PP1S59_320V6.1
Uncharacterized protein; Belongs to the RNase T2 family (318 aa)
           
  0.426
PP1S358_60V6.1
Predicted protein; Belongs to the RNase T2 family (342 aa)
           
  0.426
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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