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STRINGSTRING
PP1S8_299V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S8_299V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S8_299V6.1Predicted protein (990 aa)    
Predicted Functional Partners:
ERL1d
annotation not available (665 aa)
     
  0.746
ERL2a
ERL2a AtERECTA-like receptor S/T protein kinase protein (997 aa)
     
0.686
ERL1b
annotation not available (1007 aa)
     
0.686
ERL2b
ERL2b AtERECTA-like receptor S/T protein kinase protein (999 aa)
     
0.686
ERL1c
ERL1c AtERECTA-like receptor S/T protein kinase protein (977 aa)
     
0.686
ERL1a
annotation not available (943 aa)
     
0.686
PP1S22_359V6.1
Predicted protein (863 aa)
     
 
  0.664
PP1S40_3V6.1
annotation not available (220 aa)
     
 
  0.651
PP1S242_57V6.1
Predicted protein (270 aa)
     
 
  0.651
PP1S1_587V6.1
Uncharacterized protein (484 aa)
     
 
  0.638
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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