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ppabcb3 protein (Physcomitrella patens) - STRING interaction network
"ppabcb3" - ATP-binding cassette transporter, subfamily B, member 4, group TAP protein PpABCB4 in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppabcb3ATP-binding cassette transporter, subfamily B, member 4, group TAP protein PpABCB4 (900 aa)    
Predicted Functional Partners:
ppabcb8
ATP-binding cassette transporter, subfamily B, member 8, group TAP protein PpABCB8 (741 aa)
   
 
0.842
PP1S37_241V6.1
Predicted protein (558 aa)
     
   
  0.628
PP1S34_360V6.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (632 aa)
   
   
  0.605
PP1S177_129V6.1
Predicted protein (535 aa)
         
  0.554
PP1S86_237V6.1
annotation not available (730 aa)
           
  0.540
PP1S119_72V6.1
annotation not available (1791 aa)
           
  0.540
PP1S402_8V6.1
annotation not available (605 aa)
     
   
  0.530
PP1S233_94V6.1
annotation not available (605 aa)
     
   
  0.530
PP1S471_23V6.1
Predicted protein (1276 aa)
           
  0.522
PP1S52_256V6.1
Predicted protein (427 aa)
           
  0.521
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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