STRINGSTRING
PP1S90_153V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S90_153V6.1" - Predicted protein in Physcomitrella patens
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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Databases
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[Homology]
Score
PP1S90_153V6.1Predicted protein (469 aa)    
Predicted Functional Partners:
PP1S5951_1V6.1
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (417 aa)
     
  0.970
PP1S475_4V6.1
Annotation not available (974 aa)
     
  0.970
PP1S196_105V6.1
Annotation not available (1014 aa)
     
  0.970
PP1S137_132V6.1
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (1008 aa)
     
  0.970
PP1S474_3V6.1
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (869 aa)
     
 
  0.932
PP1S29_171V6.1
Predicted protein (546 aa)
     
      0.928
PP1S15_366V6.1
DNA-directed RNA polymerase (771 aa)
     
      0.928
PP1S96_1V6.1
Predicted protein (364 aa)
       
      0.916
PP1S83_67V6.1
Annotation not available (1509 aa)
       
      0.916
PP1S83_186V6.1
Annotation not available (2012 aa)
       
      0.916
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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