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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S90_196V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S90_196V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S90_196V6.1Predicted protein (241 aa)    
Predicted Functional Partners:
PP1S340_19V6.2
Predicted protein (236 aa)
   
   
0.850
PP1S317_73V6.1
Predicted protein (238 aa)
   
   
0.849
PP1S114_10V6.1
Predicted protein (260 aa)
 
            0.705
PP1S135_58V6.1
Predicted protein (234 aa)
           
  0.691
Per1
Uncharacterized protein (221 aa)
     
   
  0.686
PP1S1_199V6.2
Uncharacterized protein (289 aa)
 
            0.686
PP1S291_43V6.1
Predicted protein (408 aa)
     
   
  0.613
PP1S293_80V6.1
Predicted protein (828 aa)
           
  0.602
PP1S72_118V6.1
Predicted protein (165 aa)
           
  0.551
PP1S51_40V6.1
Predicted protein (220 aa)
           
  0.551
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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