• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S90_98V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S90_98V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S90_98V6.1Predicted protein (1211 aa)    
Predicted Functional Partners:
PP1S90_1V6.1
annotation not available (1149 aa)
     
 
  0.995
PP1S22_40V6.1
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family (757 aa)
           
  0.906
PP1S75_108V6.1
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family (184 aa)
     
 
  0.667
PP1S11_114V6.1
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family (184 aa)
     
 
  0.667
PP1S286_36V6.1
Predicted protein (298 aa)
     
 
  0.658
PP1S254_51V6.1
Predicted protein (298 aa)
     
 
  0.658
PP1S162_66V6.1
Predicted protein (298 aa)
     
 
  0.658
PP1S456_14V6.1
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting (809 aa)
     
   
  0.646
PP1S313_104V6.1
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting (795 aa)
     
   
  0.646
PP1S67_129V6.1
annotation not available (527 aa)
     
   
  0.624
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (14%) [HD]