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STRINGSTRING
PP1S91_238V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S91_238V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S91_238V6.1Predicted protein (349 aa)    
Predicted Functional Partners:
PP1S213_64V6.2
Predicted protein (212 aa)
     
 
  0.983
PP1S143_61V6.3
Predicted protein (214 aa)
     
 
  0.983
PP1S108_86V6.1
Predicted protein (315 aa)
     
 
  0.983
PP1S34_87V6.1
Predicted protein; Belongs to the heat shock protein 70 family (780 aa)
 
 
  0.972
PP1S201_115V6.2
Predicted protein; Belongs to the protein disulfide isomerase family (367 aa)
   
 
  0.957
PP1S288_23V6.1
Predicted protein; Belongs to the heat shock protein 70 family (662 aa)
 
 
  0.956
PP1S181_3V6.1
Predicted protein; Belongs to the heat shock protein 70 family (662 aa)
 
 
  0.956
PP1S8_67V6.1
Predicted protein (939 aa)
   
 
  0.947
PP1S126_38V6.1
Predicted protein (849 aa)
   
 
  0.947
PP1S46_100V6.1
annotation not available (145 aa)
   
 
  0.940
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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