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STRINGSTRING
PP1S91_39V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S91_39V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S91_39V6.1Predicted protein (420 aa)    
Predicted Functional Partners:
PP1S203_65V6.1
Predicted protein (701 aa)
           
  0.623
PP1S254_50V6.1
Predicted protein (431 aa)
           
  0.603
PP1S179_1V6.1
Predicted protein (342 aa)
           
  0.579
PP1S81_46V6.1
Predicted protein (389 aa)
           
  0.567
PP1S23_26V6.1
Predicted protein (395 aa)
           
  0.567
PP1S409_47V6.1
Predicted protein (522 aa)
           
  0.538
PP1S257_104V6.1
annotation not available (530 aa)
           
  0.538
PP1S240_23V6.2
Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation (342 aa)
           
  0.516
PP1S233_42V6.1
Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation (363 aa)
           
  0.516
PP1S233_15V6.1
annotation not available (271 aa)
           
  0.516
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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