• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S91_87V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S91_87V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S91_87V6.1Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (152 aa)    
Predicted Functional Partners:
PP1S96_129V6.1
annotation not available (2208 aa)
     
 
  0.937
PP1S83_4V6.1
annotation not available (1303 aa)
     
 
  0.937
PP1S67_180V6.1
annotation not available (2230 aa)
     
 
  0.937
PP1S35_178V6.1
Predicted protein (2145 aa)
     
 
  0.937
PP1S356_43V6.1
annotation not available (2218 aa)
     
 
  0.937
PP1S22_146V6.1
annotation not available (1744 aa)
     
 
  0.937
PP1S199_64V6.1
annotation not available (1694 aa)
     
 
  0.937
PP1S46_198V6.1
Predicted protein (909 aa)
     
 
  0.926
PP1S381_4V6.1
Predicted protein (888 aa)
     
 
  0.926
PP1S242_100V6.1
Predicted protein (921 aa)
     
 
  0.926
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (11%) [HD]