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STRINGSTRING
PP1S9258_1V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S9258_1V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S9258_1V6.1Predicted protein (325 aa)    
Predicted Functional Partners:
FTR2
Ferric iron permease FTR1-like protein (311 aa)
   
 
  0.938
FTR1
Iron permease, FTR1-like protein (303 aa)
   
 
  0.938
PP1S251_9V6.1
High affinity ferric iron permease (269 aa)
   
 
  0.938
PP1S2633_1V6.1
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (701 aa)
         
  0.634
PP1S316_17V6.1
Predicted protein (243 aa)
           
  0.523
PP1S58_147V6.1
annotation not available (1356 aa)
         
  0.520
PP1S83_219V6.2
Predicted protein (75 aa)
           
  0.519
PP1S61_42V6.1
Predicted protein (1457 aa)
     
   
  0.518
PP1S79_76V6.2
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (892 aa)
         
  0.518
Nia1
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
         
  0.518
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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