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STRINGSTRING
PP1S93_131V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S93_131V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S93_131V6.1Predicted protein (2251 aa)    
Predicted Functional Partners:
PP1S304_37V6.1
Predicted protein (698 aa)
   
 
  0.958
PP1S139_11V6.1
Predicted protein (698 aa)
   
 
  0.958
PP1S8_239V6.1
Amidophosphoribosyltransferase (590 aa)
   
 
  0.958
PP1S55_196V6.1
Amidophosphoribosyltransferase (623 aa)
   
 
  0.958
PP1S7_208V6.1
annotation not available (696 aa)
   
  0.944
PP1S34_402V6.1
Predicted protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family (600 aa)
   
  0.944
PP1S28_103V6.1
annotation not available (620 aa)
   
  0.944
PP1S40_17V6.1
Predicted protein; Belongs to the glutamine synthetase family (426 aa)
   
 
  0.931
PP1S81_46V6.1
Predicted protein (389 aa)
       
  0.917
PP1S23_26V6.1
Predicted protein (395 aa)
       
  0.917
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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