• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S94_36V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S94_36V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S94_36V6.1annotation not available (677 aa)    
Predicted Functional Partners:
PP1S78_33V6.1
Predicted protein (246 aa)
       
 
  0.849
PP1S84_5V6.1
annotation not available (144 aa)
     
 
  0.752
PP1S147_153V6.1
Predicted protein (1168 aa)
     
 
  0.752
PP1S58_188V6.1
Predicted protein; Belongs to the PI3/PI4-kinase family (891 aa)
     
 
  0.577
PP1S150_94V6.2
annotation not available (987 aa)
   
   
  0.566
PP1S45_82V6.1
Predicted protein (430 aa)
     
 
  0.563
PP1S31_309V6.1
annotation not available (938 aa)
     
 
  0.563
PP1S311_23V6.1
Predicted protein (923 aa)
     
 
  0.563
PP1S39_351V6.1
annotation not available (870 aa)
     
 
  0.544
PP1S2_272V6.1
Predicted protein (895 aa)
     
 
  0.544
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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