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STRINGSTRING
PP1S94_64V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S94_64V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S94_64V6.1annotation not available (108 aa)    
Predicted Functional Partners:
PP1S18_235V6.1
Predicted protein; Belongs to the MRE11/RAD32 family (716 aa)
     
 
  0.942
PP1S80_34V6.1
annotation not available (847 aa)
     
 
  0.908
PP1S15_297V6.1
annotation not available (658 aa)
     
 
  0.812
PP1S206_54V6.1
annotation not available (573 aa)
       
 
  0.766
PP1S161_13V6.1
Predicted protein (849 aa)
     
 
  0.760
PP1S158_59V6.1
Predicted protein (850 aa)
     
 
  0.760
PP1S150_94V6.2
annotation not available (987 aa)
     
 
  0.737
PP1S135_65V6.1
annotation not available (2897 aa)
     
 
  0.722
PP1S44_167V6.2
annotation not available (604 aa)
           
  0.694
PP1S65_4V6.1
Predicted protein (337 aa)
           
  0.693
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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