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STRINGSTRING
PP1S95_21V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S95_21V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S95_21V6.1Predicted protein (403 aa)    
Predicted Functional Partners:
PP1S80_92V6.1
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)- L-lysine intermediate to form hypusine, an essential post- translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family (339 aa)
         
  0.557
PP1S109_194V6.1
Predicted protein (577 aa)
         
  0.553
PP1S1_515V6.1
Tyrosine--tRNA ligase (502 aa)
         
  0.547
PP1S61_115V6.1
Predicted protein (386 aa)
     
   
  0.539
PP1S426_7V6.1
Predicted protein (369 aa)
     
   
  0.539
PP1S30_299V6.1
Uncharacterized protein (336 aa)
     
   
  0.539
PP1S12_194V6.1
annotation not available (533 aa)
   
 
  0.536
PP1S72_262V6.1
Predicted protein; Phosphoribosylformylglycinamidine cyclo-ligase (386 aa)
         
  0.533
PP1S53_111V6.1
Predicted protein; Phosphoribosylformylglycinamidine cyclo-ligase (388 aa)
         
  0.533
PP1S175_128V6.1
Predicted protein (549 aa)
         
  0.533
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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