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STRINGSTRING
PP1S95_42V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S95_42V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S95_42V6.2Predicted protein (377 aa)    
Predicted Functional Partners:
PP1S197_2V6.1
Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family (333 aa)
 
 
  0.983
PP1S67_59V6.1
Predicted protein; Belongs to the thiolase family (460 aa)
   
 
  0.961
PP1S55_275V6.1
Predicted protein; Belongs to the thiolase family (460 aa)
   
 
  0.961
PP1S2_33V6.1
Predicted protein; Belongs to the thiolase family (437 aa)
   
 
  0.956
PP1S160_44V6.2
Predicted protein; Belongs to the thiolase family (416 aa)
   
 
  0.956
PP1S180_129V6.1
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase (461 aa)
     
 
  0.955
PP1S154_103V6.2
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase (466 aa)
     
 
  0.955
PP1S6_375V6.1
Predicted protein (657 aa)
   
   
  0.943
PP1S25_162V6.1
Predicted protein (482 aa)
   
 
  0.938
PP1S60_178V6.1
Predicted protein (319 aa)
   
   
  0.924
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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