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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S96_110V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S96_110V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S96_110V6.1Predicted protein (1141 aa)    
Predicted Functional Partners:
PP1S85_101V6.1
Predicted protein (272 aa)
     
 
  0.905
PP1S17_68V6.1
Predicted protein (272 aa)
     
 
  0.905
PP1S116_90V6.1
annotation not available (1361 aa)
     
        0.885
PP1S83_219V6.2
Predicted protein (75 aa)
       
 
  0.666
PP1S89_130V6.1
Predicted protein; Cyclin B;2 ; Belongs to the cyclin family (538 aa)
     
 
  0.641
PP1S271_10V6.1
Predicted protein; Cyclin B;1 ; Belongs to the cyclin family (503 aa)
     
 
  0.641
PP1S47_242V6.1
Predicted protein (753 aa)
     
 
  0.614
PP1S87_171V6.1
Predicted protein (448 aa)
     
 
  0.605
PP1S80_128V6.1
Predicted protein; Belongs to the DEAD box helicase family (470 aa)
     
 
  0.605
PP1S51_110V6.1
Predicted protein (643 aa)
     
 
  0.583
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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