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STRINGSTRING
PP1S96_200V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S96_200V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S96_200V6.1Predicted protein (622 aa)    
Predicted Functional Partners:
PP1S38_32V6.1
Predicted protein (330 aa)
         
  0.607
PP1S207_81V6.1
Predicted protein (322 aa)
         
  0.607
PP1S58_147V6.1
annotation not available (1356 aa)
         
  0.542
PP1S97_13V6.3
Uncharacterized protein (99 aa)
           
  0.535
PP1S223_121V6.1
Predicted protein (293 aa)
           
  0.535
PP1S230_8V6.1
Predicted protein (321 aa)
     
 
  0.530
PP1S94_154V6.1
Predicted protein (321 aa)
     
   
  0.522
PP1S116_56V6.2
Predicted protein; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (498 aa)
         
  0.521
PP1S2_146V6.1
annotation not available (204 aa)
           
  0.520
PP1S2_145V6.1
annotation not available (391 aa)
           
  0.520
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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