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STRINGSTRING
cpk5 protein (Physcomitrella patens) - STRING interaction network
"cpk5" - Cpk5 calcium-dependent protein kinase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpk5Cpk5 calcium-dependent protein kinase (524 aa)    
Predicted Functional Partners:
rac2
Predicted protein; Rop-family small GTPase ; Belongs to the small GTPase superfamily. Rho family (196 aa)
       
 
  0.611
Rop3
Rop-family small GTPase ; Belongs to the small GTPase superfamily. Rho family (196 aa)
       
 
  0.611
ROP2
Rac-like GTP binding protein; Rop-family small GTPase ; Belongs to the small GTPase superfamily. Rho family (196 aa)
       
 
  0.611
Rop4
Predicted protein; Rop-family small GTPase (196 aa)
       
 
  0.611
PP1S23_38V6.3
Predicted protein; Belongs to the aldehyde dehydrogenase family (559 aa)
           
  0.512
PP1S68_168V6.1
annotation not available (217 aa)
   
 
  0.506
PP1S60_45V6.1
Predicted protein; Belongs to the small heat shock protein (HSP20) family (289 aa)
       
 
  0.505
PP1S254_1V6.1
Predicted protein; Belongs to the protein kinase superfamily (475 aa)
   
      0.444
PP1S368_13V6.1
Predicted protein; Belongs to the protein kinase superfamily (403 aa)
   
      0.443
PP1S160_110V6.1
Predicted protein; Belongs to the protein kinase superfamily (431 aa)
   
      0.443
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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