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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S98_114V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S98_114V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S98_114V6.1annotation not available (74 aa)    
Predicted Functional Partners:
3989066
Predicted protein; Belongs to the universal ribosomal protein uL16 family (561 aa)
   
      0.983
PP1S31_215V6.1
Predicted protein (502 aa)
     
 
  0.978
PP1S5_445V6.1
Predicted protein (281 aa)
     
 
  0.955
PP1S7_64V6.2
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family (384 aa)
   
 
  0.910
PP1S69_250V6.1
Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family (391 aa)
   
 
  0.910
PP1S114_90V6.1
Predicted protein; Belongs to the universal ribosomal protein uS5 family (346 aa)
   
      0.908
PP1S19_227V6.2
annotation not available (248 aa)
     
 
  0.902
PP1S358_49V6.1
Predicted protein (272 aa)
   
      0.900
PP1S21_61V6.1
Predicted protein (271 aa)
   
      0.900
PP1S7_208V6.1
annotation not available (696 aa)
   
 
  0.872
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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