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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S98_148V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S98_148V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S98_148V6.1annotation not available (534 aa)    
Predicted Functional Partners:
PP1S59_275V6.1
annotation not available (586 aa)
           
  0.692
PP1S302_56V6.1
annotation not available (1177 aa)
     
   
  0.668
PP1S90_160V6.1
Predicted protein; Belongs to the adaptor complexes medium subunit family (455 aa)
           
  0.628
PP1S65_225V6.1
Predicted protein (337 aa)
     
   
  0.625
PP1S371_9V6.1
Predicted protein (279 aa)
           
  0.621
PP1S403_11V6.1
Predicted protein (572 aa)
           
  0.602
PP1S152_120V6.1
Predicted protein (606 aa)
           
  0.602
PP1S48_125V6.1
annotation not available (2144 aa)
           
  0.591
PP1S25_273V6.1
Predicted protein (3053 aa)
           
  0.591
PP1S300_15V6.1
annotation not available (216 aa)
           
  0.588
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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