• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S98_157V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S98_157V6.2" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S98_157V6.2annotation not available (435 aa)    
Predicted Functional Partners:
PP1S34_360V6.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (632 aa)
   
   
  0.966
PP1S21_400V6.1
annotation not available (1225 aa)
   
 
  0.944
PP1S31_24V6.1
annotation not available (1688 aa)
   
 
  0.941
PP1S17_341V6.1
annotation not available (948 aa)
   
 
  0.934
PP1S9_248V6.1
annotation not available (314 aa)
     
 
  0.927
PP1S236_47V6.1
annotation not available (344 aa)
     
 
  0.927
PP1S51_220V6.1
annotation not available (1336 aa)
   
 
  0.920
PP1S45_271V6.1
annotation not available (323 aa)
       
 
  0.918
CHR1516
SNF2 family DNA-dependent ATPase (937 aa)
     
 
  0.910
PP1S341_67V6.1
annotation not available (988 aa)
     
 
  0.910
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (9%) [HD]