STRINGSTRING
PP1S98_222V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S98_222V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S98_222V6.1Predicted protein (701 aa)    
Predicted Functional Partners:
PP1S36_137V6.1
ATP-dependent Clp protease proteolytic subunit (314 aa)
 
 
  0.958
PP1S49_191V6.1
ATP-dependent Clp protease proteolytic subunit (303 aa)
 
 
  0.958
PP1S173_102V6.1
ATP-dependent Clp protease proteolytic subunit (313 aa)
 
 
  0.958
PP1S16_270V6.1
Annotation not available (248 aa)
 
 
  0.958
PP1S212_7V6.3
ATP-dependent Clp protease proteolytic subunit (307 aa)
 
 
  0.958
PP1S102_15V6.1
ATP-dependent Clp protease proteolytic subunit (250 aa)
 
 
  0.957
PP1S390_3V6.2
ATP-dependent Clp protease proteolytic subunit (304 aa)
 
 
  0.957
PP1S4_13V6.3
ATP-dependent Clp protease proteolytic subunit (312 aa)
 
 
  0.957
PP1S229_35V6.1
ATP-dependent Clp protease proteolytic subunit (258 aa)
 
 
  0.957
PP1S129_203V6.1
ATP-dependent Clp protease proteolytic subunit (258 aa)
 
 
  0.957
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (13%) [HD]