STRINGSTRING
PP1S98_4V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S98_4V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S98_4V6.1Predicted protein (625 aa)    
Predicted Functional Partners:
PP1S409_13V6.1
Predicted protein (847 aa)
   
 
0.998
PP1S263_19V6.1
Predicted protein (641 aa)
     
      0.997
PP1S93_182V6.1
Predicted protein (1046 aa)
     
      0.995
PP1S543_12V6.1
Annotation not available (1058 aa)
     
 
  0.992
PP1S28_25V6.1
Predicted protein (452 aa)
   
 
0.992
PP1S87_39V6.1
Predicted protein (862 aa)
     
      0.991
PP1S11_334V6.1
Predicted protein (140 aa)
     
      0.991
PP1S7_96V6.1
Predicted protein (1299 aa)
     
        0.991
PP1S45_24V6.1
Predicted protein (543 aa)
     
        0.991
PP1S37_119V6.1
Predicted protein (522 aa)
     
        0.991
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (19%) [HD]