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rpoC1 protein (Physcomitrella patens) - STRING interaction network
"rpoC1" - DNA-directed RNA polymerase subunit beta' in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
rpoC1DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; Belongs to the RNA polymerase beta’ chain family. RpoC1 subfamily (221 aa)    
Predicted Functional Partners:
rpoC2
DNA-directed RNA polymerase subunit beta’’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; Belongs to the RNA polymerase beta’ chain family. RpoC2 subfamily (208 aa)
   
 
  0.999
rpoA
DNA-directed RNA polymerase subunit alpha, chloroplastic; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (450 aa)
 
 
  0.995
3989066
Predicted protein; Belongs to the universal ribosomal protein uL16 family (561 aa)
 
 
  0.994
ndhD
annotation not available (72 aa)
     
   
  0.990
PP1S456_23V6.1
Predicted protein (521 aa)
     
   
  0.986
ycf1
Protein TIC 214; Involved in protein precursor import into chloroplasts. May be part of an intermediate translocation complex acting as a protein-conducting channel at the inner envelope (156 aa)
     
   
  0.955
PP1S143_15V6.1
annotation not available (68 aa)
   
   
  0.953
petB
Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (162 aa)
     
   
  0.935
psbT
Predicted protein; Photosystem II reaction center protein T (230 aa)
   
   
  0.934
petD
Cytochrome b6-f complex subunit 4; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (97 aa)
     
   
  0.915
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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