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STRINGSTRING
PP1S99_129V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S99_129V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S99_129V6.1Predicted protein (215 aa)    
Predicted Functional Partners:
PP1S87_129V6.1
Predicted protein (589 aa)
     
 
  0.924
PP1S87_126V6.1
annotation not available (417 aa)
     
 
  0.924
PP1S86_95V6.1
Predicted protein (493 aa)
     
 
  0.924
PP1S86_100V6.1
Predicted protein (590 aa)
     
 
  0.924
PP1S22_429V6.1
Predicted protein (590 aa)
     
 
  0.924
PP1S22_423V6.1
Predicted protein (601 aa)
     
 
  0.924
PP1S11_341V6.1
Predicted protein (586 aa)
     
 
  0.924
PP1S425_2V6.2
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family (529 aa)
     
 
  0.863
PP1S301_53V6.1
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family (532 aa)
     
 
  0.863
PP1S167_51V6.1
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family (530 aa)
     
 
  0.863
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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