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STRINGSTRING
PP1S99_188V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S99_188V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S99_188V6.1annotation not available (848 aa)    
Predicted Functional Partners:
PP1S362_7V6.1
annotation not available (1641 aa)
       
 
  0.574
PP1S100_106V6.1
annotation not available (1147 aa)
       
 
  0.574
PP1S104_99V6.2
Predicted protein (751 aa)
     
   
  0.538
PP1S34_87V6.1
Predicted protein; Belongs to the heat shock protein 70 family (780 aa)
           
  0.512
PP1S91_249V6.1
Predicted protein (108 aa)
           
  0.503
PP1S70_224V6.1
Intraflagellar transport protein IFT57 (431 aa)
     
   
  0.502
PP1S100_104V6.1
annotation not available (435 aa)
       
 
  0.496
GTA1501
RNA polymerase II transcription elongation factor SPT5 (1070 aa)
     
   
  0.472
PP1S144_35V6.1
annotation not available (1060 aa)
     
   
  0.472
PP1S199_36V6.1
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (674 aa)
     
   
  0.458
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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